EGAF00005757419 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757419
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	754089
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGT	3393	0.4499468895581291	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	972	0.1288972521811086	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	935	0.12399066953635446	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	768	0.10184474246408581	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	720	62.850624	70
TATACAC	815	47.768383	3
CTTATAC	780	47.355312	1
TTATACA	825	44.751507	2
TCGTATG	800	43.233273	40
CGTATGC	855	42.640896	41
TACACAT	880	41.95176	5
CTCGTAT	735	41.743465	39
TATCTCG	720	40.354332	36
GGACTCC	905	39.876015	29
TCCTATC	755	39.585186	33
GTGGTAT	665	39.386154	1
GTATCAA	5430	39.206676	1
ACGGACT	935	38.522125	27
ATACACA	995	38.114964	4
AAGGGGG	775	38.00318	69
ACTCCTA	945	37.932354	31
ACGAGAC	980	37.36071	22
GACGGAC	965	37.29726	26
GCTTGAA	925	37.106262	56