EGAF00005757504 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757504
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	355943
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6723	1.8887855639807498	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	885	0.2486353152049626	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	672	0.18879427324037837	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	402	0.11293943131344064	No Hit
GTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	384	0.10788244185164478	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	370	0.10394922782580357	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGTAAG	15	0.0028408843	65.80576	12
GTGATTG	25	0.0058743292	54.771843	69
AGTAATT	25	3.2411885E-4	52.644608	11
GCTATAA	20	0.007516093	51.466515	38
GATTTCT	20	0.00835938	50.10073	31
AGTAAGG	20	0.008870354	49.354324	13
TGATTGG	45	0.009082435	49.047558	70
GAAGTGT	30	5.661397E-4	47.015915	43
GTGGTAT	410	0.0	44.953156	1
CTTGTAT	75	1.371518E-9	39.511227	16
GTATCAA	4495	0.0	39.39205	1
TTAGATC	60	4.214653E-7	38.381298	3
TCGATTA	50	1.0540006E-4	37.99156	64
TTGTATC	80	2.577508E-9	37.046986	17
GGTATCA	1965	0.0	37.01568	1
AAGAGTA	65	7.8800986E-7	35.433872	10
TATCAAC	5120	0.0	34.51432	2
TCCCAAC	60	1.4321582E-5	34.16579	37
AGGGATC	40	0.0030701067	33.333904	30
CAACTCA	40	0.0032723171	32.90288	5