EGAF00005757535 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757535
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	576269
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGT	3590	0.6229729518679644	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1177	0.20424489257621006	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1165	0.20216253173431156	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	920	0.15964766454555077	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	628	0.10897688405935424	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	623	0.10810923370856318	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	865	0.0	67.16796	70
GCGTATG	20	0.0073020267	51.848267	40
CTTATAC	865	0.0	49.59857	1
ATACGGG	55	3.8435246E-9	48.003094	1
TATACAC	940	0.0	47.021095	3
CTCGTAT	735	0.0	45.381866	39
TCTCGTA	710	0.0	45.281075	38
AATCTCG	705	0.0	44.786682	36
TTATACA	975	0.0	44.318237	2
TACACAT	985	0.0	43.868305	5
TCGTATG	940	0.0	43.39075	40
GTATGCC	990	0.0	43.026222	42
CCGTCTT	975	0.0	42.999508	47
CGTATGC	975	0.0	42.430706	41
CCCACGA	1050	0.0	40.87042	19
ACGAGAC	1035	0.0	40.84259	22
ATCTCGT	770	0.0	40.695904	37
CTTGAAA	1005	0.0	40.467438	57
GCTTGAA	1010	0.0	39.78496	56
ATACACA	1090	0.0	39.64246	4