EGAF00005757563 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757563
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	467156
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT	3164	0.6772898132529604	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1485	0.317880964816892	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1166	0.24959542422659667	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	895	0.19158482391321102	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	708	0.1515553690844172	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	669	0.14320698010942812	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	552	0.11816181318446087	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	490	0.10489001532678591	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCGTA	35	4.458343E-9	68.38562	38
TGTTATT	15	0.003013106	64.838936	25
ATTATCG	20	0.0043828143	58.9846	64
ATATCGT	35	3.642108E-7	58.259953	37
AGGGGGG	740	0.0	54.92353	70
GTGGTAT	755	0.0	51.80128	1
CACTATC	20	0.007806753	50.97746	37
CACAGAT	25	0.007813295	50.96455	68
TAAGTAC	20	0.008149208	50.426872	35
ATCGTAT	55	2.6429916E-9	50.069546	39
CTTATAC	650	0.0	49.229336	1
CTAGCTC	20	0.009526685	48.473053	3
AAGGCAC	25	0.009782551	48.14711	66
TATACAC	695	0.0	46.496937	3
TTATACA	690	0.0	46.36553	2
GCTGATA	60	7.785275E-9	44.315643	33
GTATGCC	790	0.0	43.662483	42
TCGTATG	765	0.0	43.51977	40
CTCTTAT	45	2.9118619E-6	43.096386	1
CGTATGC	785	0.0	42.710243	41