EGAF00005757583 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757583
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	684990
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGT	2326	0.33956700097811643	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1882	0.27474853647498504	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1573	0.2296383888815895	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1252	0.18277639089621747	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1023	0.14934524591599876	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	901	0.1315347669309041	No Hit
GTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	736	0.10744682404122688	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGTTA	15	0.0019928012	71.96785	48
TAGATTG	25	4.019763E-6	66.02044	4
AGGGGGG	760	0.0	59.97283	70
TTAAACG	20	0.004343375	59.123173	67
TGTTACG	35	0.0048634233	57.45297	70
GTGGTAT	1105	0.0	51.71892	1
CGTCAGA	65	5.456968E-12	50.784954	5
CTTATAC	950	0.0	47.29126	1
TATACAC	1030	0.0	45.509235	3
TTATACA	1025	0.0	45.4125	2
TCCGTCT	40	4.1203184E-5	44.56146	46
CTCGTAT	540	0.0	44.52685	39
CTTAATC	35	9.109219E-4	42.694176	60
TCGTATG	635	0.0	41.86497	40
CGTATGC	660	0.0	41.528316	41
AGACTAA	1115	0.0	40.354916	25
GAGACTA	1115	0.0	40.32541	24
TAAGGCG	1130	0.0	40.324455	29
CCCACGA	1125	0.0	39.92901	19
TACACAT	1175	0.0	39.612263	5