EGAF00005757588 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757588
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	851675
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	4376	0.5138110194616491	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	2547	0.299057739161065	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	1354	0.15898083189009893	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1024	0.12023365720491971	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1001	0.1175330965450436	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	970	0.11389321043825403	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	928	0.1089617518419585	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	927	0.10884433616109432	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATATC	15	0.0016608966	75.35099	62
AATCTAT	90	1.3751487E-6	48.054832	70
CTAACGT	35	3.0474675E-5	46.898445	4
GTGGTAT	1425	0.0	45.18599	1
TCCGTAG	70	0.0010862874	41.189857	70
CACTGCT	285	0.0	40.33752	11
ACGTTAG	35	0.0017154963	37.53859	7
GTATCAA	11780	0.0	36.923706	1
AACCTAC	40	0.0018728973	36.872986	56
GGTATCA	5395	0.0	33.430546	1
CTCACGT	45	0.003172338	33.11668	59
CAATCTA	85	1.8539415E-5	32.907158	69
TCTAGCC	45	0.00329004	32.871372	57
TATCAAC	13280	0.0	32.83855	2
ATAAACG	90	8.414645E-9	32.830837	3
CTATAGA	70	1.4346315E-6	32.82891	4
TTGTATC	280	0.0	31.70112	17
TAGAGGC	85	1.8584797E-7	30.914133	7
CCCTCAT	45	0.0047602095	30.482376	38
ATCAACG	14490	0.0	30.043955	3