EGAF00005757595 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757595
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1102079
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCCGT	4931	0.44742709007249026	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1603	0.14545236775222103	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1406	0.12757706117256568	No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATGTCGTATGCCGT	1266	0.11487379761341973	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1163	0.10552782513776236	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1315	0.0	54.51311	70
CTTATAC	1380	0.0	50.26522	1
TATACAC	1550	0.0	45.59013	3
GTGGTAT	1170	0.0	45.25302	1
TTATACA	1660	0.0	42.16751	2
TATGCCG	1570	0.0	41.02186	43
ATACACA	1770	0.0	40.869617	4
CTCGTAT	1105	0.0	40.55609	39
TCGTATG	1540	0.0	38.63186	40
CCGTCTT	1535	0.0	38.604313	47
CGAGACA	1855	0.0	38.12012	23
ACGAGAC	1865	0.0	37.908844	22
CGTATGC	1650	0.0	37.672108	41
TCTCGTA	1180	0.0	37.549442	38
CTTGAAA	1580	0.0	37.452755	57
CGCGTAT	65	5.4846896E-7	37.12442	39
AATCTCG	1215	0.0	37.113785	36
GCCGTCT	1575	0.0	36.599552	46
GCTTGAA	1580	0.0	36.2255	56
TACACAT	2060	0.0	35.929	5