EGAF00005757602 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757602
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76230
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	4492	5.892693165420438	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	223	0.2925357470812016	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	196	0.25711662075298436	No Hit
CTGAAAGACAGGCTATTTTATTTCAAAAAAAGAAAAAAAAGTGGGCTCTGGGAACAGGGACTAGCCCGTACTCTG	138	0.18103109012199922	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	120	0.15741833923652104	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	117	0.153482880755608	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	107	0.14036468581923128	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	107	0.14036468581923128	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	92	0.12068739341466615	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	91	0.11937557392102847	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	83	0.10888101797192706	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCGAT	20	4.03021E-4	107.39275	70
TGCATCA	15	0.0016143447	75.81318	55
TCGTACA	15	0.0031045822	64.29915	16
CATTCTC	20	0.004358182	59.009853	62
TCATTCT	20	0.0044988347	58.53891	61
CGCAGTG	20	0.004642841	58.075417	59
GTACCCT	20	0.0047308756	57.800827	58
CGTACCC	20	0.0048954943	57.304104	57
GTTCTCT	20	0.0049870643	57.03674	56
TCGTACC	20	0.0049870643	57.03674	56
AGGTGTT	20	0.005048815	56.859882	55
TTAGATC	40	2.073648E-8	56.18787	3
GGTCATT	20	0.005904478	54.65667	48
AGACAGC	20	0.005904478	54.65667	48
CTACCCT	20	0.0061342698	54.13229	47
CCGTCTA	20	0.0065948106	53.15163	43
AGTATCG	25	0.00661151	53.10353	68
TTGCGAA	25	0.00661151	53.10353	68
TTCTGCC	20	0.0076557724	51.1858	38
TCGGTCC	20	0.008628921	49.66097	31