EGAF00005757608 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757608
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	397307
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	13772	3.4663371146242072	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1058	0.2662928163863209	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	687	0.1729141444776961	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	461	0.11603117991880335	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	423	0.10646678764783908	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	417	0.1049566204471605	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCTAGA	15	0.0028704228	65.63565	19
GGATACT	15	0.0028704228	65.63565	19
TTACTTG	35	0.0039394707	60.582058	70
GCGTAAT	35	0.0039394707	60.582058	70
TTAGGAA	25	1.6617561E-4	60.265896	61
ACACATA	30	3.4577935E-4	51.958282	66
AGTGTAG	20	0.0074122604	51.649006	39
ATTTAGG	30	4.225708E-4	49.88951	59
GTGGTAT	770	0.0	49.822083	1
CTTGTAT	40	1.1688626E-6	49.201927	16
TTGTATC	40	1.1688626E-6	49.201927	17
TATGATT	35	9.51554E-4	42.31237	55
CTCAGAG	40	6.764383E-5	40.965473	8
AACTCAG	50	5.460228E-6	39.326855	6
AAGCTTG	40	0.0014263701	38.96871	66
TTTAGGA	40	0.0017195779	37.514194	60
GATTTAG	40	0.0017675814	37.304527	58
AGTGACC	50	1.1937981E-4	37.197914	57
CAACTCA	45	1.3535726E-4	36.413754	5
AAGAGTG	55	1.0319838E-5	35.841934	22