EGAF00005757613 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757613
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	580243
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGT	4145	0.7143558819322249	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1926	0.33192989833569725	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1874	0.3229681357638093	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1414	0.24369100532018484	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	960	0.16544792440408587	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	872	0.15028186466704468	No Hit
GTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	628	0.1082305172143395	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	625	0.10771349245057675	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTAATA	30	0.0019864584	72.01373	70
GTATGCA	20	7.690757E-5	70.42484	42
CCACTTA	15	0.0022327935	69.93241	41
CGATTTA	20	9.588403E-5	67.357666	35
CTTAGCT	15	0.0030346033	64.72474	21
TAGCATC	15	0.0030408353	64.691246	18
CTAGCAT	15	0.0030429147	64.68009	17
ATACTAG	15	0.0030502009	64.641075	14
AGGGGGG	1055	0.0	60.75092	70
ATACGGG	130	0.0	57.212067	1
CTTGTAA	20	0.00501622	57.00965	57
CTAGGTA	20	0.00501622	57.00965	57
ACCTTAG	40	0.0062089963	54.010296	70
CATATAC	30	1.3382767E-5	53.895428	1
AATTTAC	20	0.006601103	53.188164	43
AGTATGC	20	0.0069766277	52.449306	41
CTTATAC	1145	0.0	48.57649	1
TACTAGC	20	0.009515341	48.48916	15
TTAGGTC	20	0.009518582	48.48498	4
TATACAC	1225	0.0	46.967766	3