EGAF00005757622 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757622
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	717373
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	7285	1.0155107593957398	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	2264	0.31559593126588265	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	972	0.1354943662501934	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	832	0.11597871679028901	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	780	0.10873004699089595	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	766	0.1067784820449055	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTATCG	20	0.005265875	56.316097	61
CACAGTC	20	0.0058595133	54.816307	52
CGTATGG	40	0.0060475394	54.37431	70
AGTCTAA	55	3.2159738E-4	52.7266	70
GTGGTAT	1245	0.0	44.471947	1
CATAGTA	35	0.001697663	37.61774	10
ATAGTAC	35	0.0016982445	37.615116	11
TAGTACG	35	0.0016982445	37.615116	12
GTATCAA	9225	0.0	36.83312	1
CATACCT	55	9.043246E-6	36.544914	32
TCCGCTA	50	2.1283445E-4	33.719658	34
CTATCGA	45	0.0029896344	33.51913	62
TGTGTAC	40	0.0032239393	33.007587	24
TATCAAC	10325	0.0	32.98174	2
TAGCTGG	40	0.0032449814	32.96379	21
GACAGTA	40	0.003248314	32.956886	1
AGGGTAC	40	0.0032683648	32.91552	3
TACACGG	40	0.0032694817	32.913227	5
TAGGGAC	50	2.455478E-4	32.908638	4
AAGACGT	90	0.0036248902	32.221813	70