EGAF00005757656 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757656
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	709902
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6914	0.9739372476764399	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1281	0.18044744204129584	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1086	0.15297886187107518	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	753	0.10607097881115984	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	727	0.10240850145513043	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	717	0.10099985631819602	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	710	0.10001380472234196	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGACC	20	0.008611571	49.730625	4
TATTCAA	90	1.0426699E-4	38.062916	70
GTATCAA	7715	0.0	37.498966	1
GTGGTAT	1135	0.0	35.661755	1
CTAGTTA	45	0.002218718	35.62046	68
TATCAAC	8475	0.0	34.1242	2
GGTATCA	3595	0.0	33.684704	1
GTTATCA	40	0.0031440046	33.177124	1
CTCATTG	40	0.0031559702	33.151413	9
CGAAAGT	110	3.3901524E-4	31.142385	70
ATCAACG	9415	0.0	30.88029	3
TCAACGC	9525	0.0	30.386585	4
TCTGAGG	45	0.0048441566	30.372953	36
AACGCAG	9560	0.0	30.203854	6
TAGTTTG	55	4.1129312E-4	30.137651	7
TACGCTA	50	0.0051861256	29.95179	64
CAACGCA	9760	0.0	29.720789	5
TTCTAGT	45	0.0056144358	29.470001	4
CCACTCA	45	0.005616369	29.467926	6
GTTGCAC	95	3.9674524E-7	28.348316	31