EGAF00005757686 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757686
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	464321
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	16662	3.588465738142363	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1386	0.29850039089336905	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	910	0.19598510513200995	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	635	0.13675883709761133	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	585	0.1259904247277207	No Hit
GTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	575	0.12383674225374255	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	557	0.11996011380058193	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	553	0.11909864081099067	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	477	0.10273065400875689	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGGTC	15	0.0019267327	72.57772	47
CGTGGGT	35	0.0034070278	62.84659	70
AAACGTG	20	0.008830983	49.412167	29
AGTCTGT	20	0.009290811	48.781555	23
GTGGTAT	985	0.0	43.779076	1
GTCATAT	30	8.564243E-4	43.230465	1
GCTTCTA	30	8.564243E-4	43.230465	1
CGTGAGA	45	2.8672184E-6	43.193203	12
GTGAGAG	45	2.8672184E-6	43.193203	13
TTGAGTA	30	8.605246E-4	43.18855	3
CTTGAGT	30	8.605246E-4	43.18855	2
TCATATG	30	8.605246E-4	43.18855	2
TTTCCAG	70	9.978293E-4	41.897724	70
GGTAGAC	35	0.0014217128	38.997406	37
TATACCT	50	1.1126035E-4	37.647366	56
AGTCGTG	35	0.0018072684	37.138783	22
AAAGTAC	35	0.0018275031	37.054684	1
TGAGTAC	35	0.0018372015	37.01477	4
AACGTGA	80	0.0019235255	36.66051	70
GTATCAA	7440	0.0	35.516968	1