EGAF00005757702 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757702
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	451868
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	8758	1.9381766356546604	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1635	0.3618313312737348	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	768	0.16996113909371763	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	641	0.1418555861446263	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	570	0.12614303292111856	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	524	0.11596306886081777	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	500	0.11065178326413909	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	493	0.10910265829844114	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	463	0.1024635513025928	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	462	0.10224224773606452	No Hit
GTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	460	0.10179964060300795	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCTAAA	20	0.0057544853	55.063686	52
GCTTAAA	25	3.3143308E-4	52.410236	1
TTGAGTA	25	3.3324992E-4	52.35224	3
TTCACAT	20	0.008515212	49.86935	30
ATGACTA	20	0.009065326	49.08566	5
GTGGTAT	985	0.0	45.227108	1
AGAGTGA	40	0.0016899105	37.648586	60
CAACTCA	35	0.0017445013	37.406876	6
TGGTAGT	35	0.0017473488	37.39446	4
GACAAGT	50	0.0018822548	36.829144	69
GTATCAA	6900	0.0	35.46236	1
TTCTGTC	45	0.0026387707	34.38029	65
GGCTTTA	45	0.0030954839	33.278973	58
ACTCAGA	60	1.9207704E-5	32.734642	8
TTACTGC	60	1.922226E-5	32.731018	6
AAACCAT	60	2.7717158E-4	32.231525	65
TCTAAGA	45	0.0037025234	32.084637	47
GGTATCA	3535	0.0	31.783434	1
TATCAAC	7710	0.0	31.669699	2
GAATCCC	45	0.005040587	30.124622	36