EGAF00005757710 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757710
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1609940
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	3533	0.21944917201883302	No Hit
GTATTACTGTCAATGTTTTGGTAGCTCACCTTTATTCACTTTCGGCCCTGGGACCAAAGTGGAGATCAAACGAA	3036	0.18857845633998782	No Hit
GTGTATTACTGTCAATGTTTTGGTAGCTCACCTTTATTCACTTTCGGCCC	2467	0.1532355243052536	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2323	0.14429109159347553	No Hit
GTCTGGGACAGACTTCACTCTCACCATCACCAGACTGGAGCCTGAAGATT	2266	0.1407505869783967	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	2229	0.13845236468439817	No Hit
GTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGAGACCA	2198	0.13652682708672373	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	2139	0.13286209423953688	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	2115	0.13137135545424053	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1979	0.12292383567089457	No Hit
CAGTAATACACTGCAAAATCTTCAGGCTCCAGTCTGGTGATGGTGAGAGTGAAGTCTGTCCCAGACCCACTGCCA	1916	0.11901064635949166	No Hit
GTAATACACTGCAAAATCTTCAGGCTCCAGTCTGGTGATGGTGAGAGTGAAGTCTGTCCCAGACCCACTGCCA	1826	0.11342037591463036	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1735	0.10776799135371505	No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT	1727	0.10727107842528293	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1627	0.1010596668198815	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	815	45.05392	1
GGTATCA	2650	42.4751	1
TGGTATC	900	42.30034	2
GTATCAA	6455	39.87232	1
TATCAAC	7260	35.384136	2
ATCAACG	7790	33.006405	3
TCAACGC	7845	32.728252	4
CAACGCA	8010	32.22426	5
AACGCAG	8060	32.02933	6
CGCAGAG	8605	29.883078	8
AGAGTAC	8670	29.500856	11
ACGCAGA	8850	29.133287	7
GCAGAGT	8890	28.92507	9
CAGAGTA	8965	28.491865	10
AGTACGG	6590	25.959095	13
GAGTACG	6660	25.893764	12
GAGTACT	3515	23.604319	12
ACGGGTA	250	23.323074	16
TACGGGG	3020	23.045734	15
ACGGGGA	1370	23.032661	16