EGAF00005757762 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757762
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	760499
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	9473	1.2456295143057388	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	2067	0.2717952291850482	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	1318	0.17330726273144342	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	827	0.10874439019643682	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	819	0.10769244929973609	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	802	0.10545707489424706	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGTCT	15	0.0028074596	66.00982	21
CTTATGG	20	0.005212439	56.46178	62
CTAGGAC	30	2.5802484E-4	55.139072	68
GTGGTAT	1070	0.0	51.444496	1
CGTACGT	50	1.0016265E-7	46.10049	10
CTAATGT	35	7.58873E-4	44.307957	66
AAACTAG	40	0.0015551102	38.294888	65
GTATCAA	9395	0.0	36.83823	1
TAAGTAT	55	8.576861E-6	36.828575	34
GGGGCTA	45	1.3061076E-4	36.640717	18
GATAAGT	55	8.993922E-6	36.574497	32
CTCTAAG	55	1.0105972E-5	35.95794	1
GGTATCA	4565	0.0	34.15282	1
AAAGTGT	85	0.0029351793	33.640976	70
CTAGATG	40	0.0031489548	33.166744	27
TAGGACA	70	2.413139E-4	33.00448	69
CGGTATC	50	2.4420288E-4	32.939754	2
TATCAAC	10495	0.0	32.798515	2
ACTCCGT	90	1.2699456E-7	32.283817	51
ATAAACG	85	1.8206993E-7	30.98581	3