EGAF00005757781 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757781
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	533496
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGT	2050	0.38425780137058196	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1820	0.34114595048510205	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1393	0.2611078621020589	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1032	0.19344100049484908	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	839	0.1572645343170333	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	635	0.11902619700991197	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	591	0.11077871249268972	No Hit
TAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTT	585	0.10965405551306852	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	575	0.10777962721369982	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	542	0.10159401382578313	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTATTC	15	0.0030325784	64.734924	18
AGCTAGT	35	5.09297E-7	55.502697	1
AGGGGGG	815	0.0	48.83507	70
TATACGA	20	0.009470492	48.546642	2
CTTATAC	735	0.0	48.014233	1
TTATACA	735	0.0	47.555897	2
TATACAC	785	0.0	45.763718	3
ACACTAC	30	8.304062E-4	43.503338	28
AGTAATT	30	8.641787E-4	43.152573	2
GTGGTAT	1055	0.0	42.964172	1
GTATGCC	610	0.0	42.522945	42
CGTATGC	550	0.0	42.32664	41
TCGTATG	565	0.0	39.713158	40
ATACACA	910	0.0	39.47749	4
GAGACTA	855	0.0	38.700905	24
TAAGGCG	890	0.0	37.85294	29
CGAGACT	905	0.0	37.255142	23
CGTGAAA	185	0.0	37.124935	57
CAACAGT	35	0.0018457044	36.980988	14
ACGAGAC	920	0.0	36.979267	22