EGAF00005757782 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757782
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	533496
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	8156	1.5287837209651056	No Hit
CTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGGCAGCACTTCC	1981	0.37132424610493797	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	847	0.15876407695652825	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	828	0.15520266318772774	No Hit
GTATCAACGCAGAGTACGGGCTAGTCCCTGTTCCCAGAGCCCACTTTTTTTTCTTTTTTTGAAATAAAATAGC	805	0.15089147809917977	No Hit
GTATCAACGCAGAGTACGGGTTCTAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTTGG	649	0.12165039662902814	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	637	0.11940108266978572	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	603	0.11302802645193216	No Hit
TAATACGACTCACTATAGGGAAGTGATACCAGCATCGTCTTGATGCCCTT	569	0.10665497023407859	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	550	0.10309355646527808	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCCC	15	0.0029798432	65.02209	21
ATTAGCA	15	0.0030144104	64.83316	4
TTAGACT	20	0.00654835	53.295536	44
CTTACTC	20	0.009396508	48.64311	2
CATTAGC	20	0.009410442	48.624874	3
GTGGTAT	1250	0.0	42.059196	1
CTCAGGT	50	1.0301938E-4	38.144093	59
GTATCAA	8080	0.0	35.184284	1
TTCCAAC	55	1.9310859E-4	34.279476	56
ATTTGCG	50	2.4704364E-4	32.87259	29
GCTTTAT	50	2.663909E-4	32.453083	1
TTTACGC	50	2.681564E-4	32.41658	3
TGCTTTA	50	0.0036995753	32.090233	66
TATCAAC	8955	0.0	31.686373	2
GGTATCA	4010	0.0	30.996338	1
ATCAACG	9775	0.0	29.017399	3
TCAACGC	9755	0.0	28.94397	4
TGAGTAA	45	0.00625359	28.825546	11
AGAGCAG	45	0.00625359	28.825546	11
AACGCAG	9825	0.0	28.77884	6