EGAF00005757788 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757788
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	335098
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	5138	1.533282800852288	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	807	0.24082507206846954	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	473	0.1411527374081612	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	457	0.13637801478970332	No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT	376	0.11220598153376027	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	350	0.10444705727876621	No Hit
CCCTGACGCTGAGCAAAGCAGACTACGAGAAACACAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCT	346	0.10325337662415175	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	337	0.10056759515126919	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTAA	15	0.0020850315	71.14324	49
TCGTAAA	20	0.006430375	53.536575	50
GTTCGGA	20	0.0068297302	52.727325	44
GTGGTAT	300	0.0	47.83795	1
GGGTCGC	30	7.4397086E-4	44.480473	15
GTATCAA	2455	0.0	42.415882	1
GACACTA	65	0.0012697898	39.890556	70
TGGTATC	370	0.0	39.653996	2
TATCAAC	2820	0.0	36.6563	2
GGTATCA	885	0.0	36.203735	1
CGGAATC	40	0.0024420228	34.926083	42
ATCAACG	2965	0.0	34.633564	3
TCAACGC	2995	0.0	34.276413	4
CAACGCA	3050	0.0	33.767593	5
GTAATGA	50	2.2580718E-4	33.375317	1
AACGCAG	3150	0.0	32.695606	6
ACGCAGA	3300	0.0	31.310442	7
CGCAGAG	3335	0.0	30.881905	8
CGGGCTA	175	0.0	30.528267	17
GTATTAC	45	0.005308579	29.80508	25