EGAF00005757789 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757789
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1341041
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	2443	0.18217190973281205	No Hit
GTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATTTTTTTGGGTT	2338	0.17434217149214676	No Hit
GTCTACAAACTCCGTTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAA	1907	0.14220296023760645	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1867	0.1392202028125911	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1656	0.12348615739563519	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	1564	0.1166258153180999	No Hit
CCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTG	1443	0.10760297410742849	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	1436	0.10708099155805079	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	1383	0.10312883796990548	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	280	0.0	39.62177	43
GGTATCA	1490	0.0	39.467396	1
TCGTATG	255	0.0	39.363895	40
GTATCAA	3485	0.0	37.20208	1
TACGACG	70	0.0021001233	36.022625	70
CTTATAC	395	0.0	33.954407	1
CGTATGC	310	0.0	33.51918	41
GTGGTAT	585	0.0	33.50793	1
TATCAAC	3885	0.0	33.18481	2
TGGTATC	605	0.0	32.390564	2
ATCAACG	4080	0.0	31.683033	3
GCGCGAA	55	3.1722465E-4	31.50547	42
TCAACGC	4095	0.0	31.483023	4
ACGAGAC	375	0.0	31.174198	22
CAACGCA	4185	0.0	30.805967	5
AACGCAG	4250	0.0	30.496605	6
AATCTCG	255	0.0	29.792917	36
ATCTCCG	435	0.0	29.241209	10
GCTAATC	300	0.0	28.7299	33
CTCGTAT	280	0.0	28.410841	39