EGAF00005757872 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005757872
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	63643
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	477	0.7494932671307135	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	128	0.20112188300362963	No Hit
GTATAATAACTGGCCTCCGAATACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCAT	113	0.17755291233914178	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	106	0.16655405936238077	No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT	92	0.1445563534088588	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	91	0.14298508869789295	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	83	0.13041497101016608	No Hit
GTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTTTGGCTCCCAGATATCA	80	0.12570117687726853	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	78	0.1225586474553368	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	75	0.11784485332243923	No Hit
GTTATTATACTGCTGACAGTAATAAACTGCAAAGTCTTCAGACTGCAGGCTGCTGATGGTGAGAGTGAACT	73	0.11470232390050751	No Hit
GTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGACT	71	0.11155979447857582	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	69	0.1084172650566441	No Hit
GTCTATGTCTTCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTA	64	0.10056094150181481	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGCGA	15	0.0024269014	68.40623	34
GACCGCG	15	0.00245005	68.242836	33
TGCGACC	15	0.002496841	67.91838	30
AAGTATC	15	0.0025522683	67.54373	26
CCGGGGA	20	0.0069550686	52.434544	45
GATAAAC	20	0.0069775563	52.391808	44
GAGCCCG	20	0.0071136197	52.13686	41
AAATACC	20	0.0075336727	51.386692	35
TGTATTA	20	0.0075336727	51.386692	35
CGCGAGA	20	0.0075336727	51.386692	36
CGACCGC	20	0.0077019096	51.100758	32
GCGACCG	20	0.00777486	50.979183	31
CAGCGCT	20	0.008046752	50.538326	4
ATAATAC	20	0.008046752	50.538326	3
GTGGTAT	30	7.0150074E-4	44.9583	1
TACGGGT	30	7.042281E-4	44.922955	16
CGGGGGA	30	7.042281E-4	44.922955	17
TGGTATC	30	7.042281E-4	44.922955	2
ACGGGGG	45	2.1585238E-6	44.92295	16
GGTATCA	145	0.0	39.5323	1