EGAF00005758019 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005758019
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	934381
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATATACGGCCGTGTCGTCGGCTCTCAGGCTGTTCATTTGCAGATGCA	1341	0.14351747306505588	No Hit
CTCCTGTACAGCCTCTGGATTCACCTTTAGCAATTATGCCATGGCCTGGGTCCGCCAGGCTCCAGGGAAGGGG	1249	0.13367138244463447	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1216	0.13013963254817895	No Hit
GTATATTACTGTGCGAGGAACCCGATGGGGCCCCGCCTAGGAGATTGTACTGGTGGTCTTTGTTTCTTTGACTA	1113	0.11911629196227234	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1082	0.11579858751408686	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1054	0.11280195123830643	No Hit
AGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTC	985	0.10541738327299036	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	975	0.1043471560316402	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGTAT	20	0.0075407876	51.43087	12
GTATCAA	2445	0.0	41.647312	1
TATCAAC	2675	0.0	37.429577	2
TCAACGC	2740	0.0	36.541653	4
ATCAACG	2745	0.0	36.350174	3
CAACGCA	2825	0.0	35.442165	5
AACGCAG	2900	0.0	34.762035	6
ACGCAGA	3075	0.0	32.896976	7
ACTCGAC	130	5.456968E-12	31.685377	27
AGAGTAC	3210	0.0	31.189646	11
CAGAGTA	3300	0.0	30.54682	10
GCTAATC	45	0.0047294265	30.52329	28
CGCAGAG	3350	0.0	30.196478	8
TCGTATG	105	2.2439053E-8	29.686152	40
CGACGTC	140	1.4551915E-11	29.452116	30
GCAGAGT	3485	0.0	29.318792	9
CGTATGC	95	3.0740193E-7	29.18901	41
CTCGACG	145	2.3646862E-11	28.418236	28
GTGGTAT	340	0.0	28.235044	1
GTATAAC	50	0.007973266	27.428331	1