FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005758050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005758050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417497
Sequences flagged as poor quality0
Sequence length20-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10600.2538940399571733No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT4630.11089900047185969No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)