EGAF00005758172 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005758172
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	97261
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	331	0.3403214032345956	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTCA	20	6.209585E-4	96.40155	70
GGCGTTA	45	2.8265276E-8	54.04883	43
CGCTCAT	20	0.006505751	53.349434	60
GAAACGA	20	0.007120641	52.145855	44
CTAGACA	20	0.007714809	51.100258	4
CCGATTG	50	7.243398E-8	47.964836	33
GTGGTAT	45	1.99006E-6	45.492622	1
CGATTGG	55	1.508015E-7	43.69477	34
TACCCGA	55	1.539047E-7	43.581867	30
CCCGATT	55	1.539047E-7	43.581867	32
GGAGTTA	55	1.5834121E-7	43.424774	25
CGTTATC	60	2.6402267E-7	40.685963	45
GCGTTAT	60	2.7064925E-7	40.557888	44
GTATCAA	355	0.0	40.36669	1
TTACCCG	60	3.0724186E-7	39.908794	29
GTTACCC	60	3.122641E-7	39.82655	28
GGGCGTT	70	2.0509106E-8	39.646973	42
TATCAAC	375	0.0	39.083397	2
TGGGAGT	70	2.3861503E-8	38.973606	23
ATCAACG	380	0.0	38.54932	3