EGAF00005758225 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005758225
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	859125
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTATTACTGTGCGAGGGACATAGGATATTGTAGTGATCCCAGTTGCTACGCGGACTGGTTCGACCCCTGGGGC	1278	0.14875600174596246	No Hit
GTAATACACAGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACA	1272	0.14805761676123963	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1097	0.12768805470682382	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	934	0.10871526262185363	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	931	0.1083660701294922	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT	912	0.10615451767786992	No Hit
GTATGGTACCTCACCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCAT	906	0.10545613269314709	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATTGT	45	1.8851903E-4	58.75137	70
ATATACG	45	1.9301733E-6	45.7563	3
GTATCAA	1690	0.0	37.972317	1
GGTATCA	765	0.0	35.887295	1
TATCAAC	1890	0.0	33.954086	2
TCAACGC	1970	0.0	32.575237	4
CAACGCA	2005	0.0	32.350792	5
ATCAACG	1995	0.0	32.339043	3
AACGCAG	2060	0.0	31.655499	6
GTGGTAT	315	0.0	29.414768	1
AGAGTAC	2340	0.0	27.864418	11
CGCAGAG	2345	0.0	27.805006	8
ATACGAG	50	0.007934661	27.455381	5
ACGCAGA	2375	0.0	27.453785	7
CAGAGTA	2450	0.0	26.473291	10
GCAGAGT	2480	0.0	26.153051	9
TGGTATC	395	0.0	25.19493	2
TTCGGGG	535	0.0	24.70852	70
TGTTAGA	215	1.3692661E-6	24.593596	70
AGTACGG	2035	0.0	24.449232	13