EGAF00005758369 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005758369
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29406
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAAT	47	0.15983132694008026	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	41	0.13942732775624023	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	41	0.13942732775624023	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	40	0.13602666122560023	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	39	0.1326259946949602	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCAC	38	0.1292253281643202	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	34	0.11562266204176018	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	105	0.0	54.476273	1
ACTGTCA	25	0.007345464	51.61174	69
GTATCAA	250	0.0	39.030647	1
TATCAAC	290	0.0	33.647106	2
ATCAACG	300	0.0	32.52554	3
TCAACGC	300	0.0	32.52554	4
CAACGCA	305	0.0	31.992334	5
AACGCAG	305	0.0	31.992334	6
ACGCAGA	325	0.0	30.023575	7
TACGGGG	90	2.3482608E-7	29.90854	15
ACGGGGA	45	0.005143259	29.90854	16
AGAGTAC	355	0.0	27.48637	11
CGCAGAG	355	0.0	27.48637	8
CAGAGTA	355	0.0	27.48637	10
GCAGAGT	365	0.0	26.73332	9
GAGTACG	285	0.0	24.792606	12
AGTACGG	295	0.0	23.95218	13
GTACGGG	315	0.0	22.431406	14
TACGGGA	165	2.1705346E-6	18.352968	15
TACTTTT	190	4.1876228E-7	17.709003	15