EGAF00005758474 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005758474
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	181460
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1358	0.7483742973658106	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGTATC	15	0.0027335256	66.43512	1
CATGTTT	15	0.0027545355	66.30697	14
AGTCACT	25	2.3156557E-4	56.336674	42
TTACTAG	20	0.005621074	55.37619	63
GATTCTG	20	0.0057103573	55.156174	61
TCAAAGG	35	3.9580005E-4	50.53352	69
GGTAGCA	20	0.008573506	49.771374	2
CTGGAAA	75	2.2918415E-5	49.147877	70
ACTTGTC	30	5.4283725E-4	47.40504	46
CTTGTAT	30	7.6618406E-4	44.204647	16
TGCATAA	30	7.6618406E-4	44.204647	13
GTTGTAG	40	6.233581E-5	41.52195	1
ATCAGTC	35	0.0012917356	39.75187	39
CCAAGTT	35	0.0014819908	38.656654	30
GTAGCAC	35	0.0016309941	37.91059	3
GCATAAC	35	0.0016354193	37.889698	14
ACTACGT	35	0.0016354193	37.889698	6
CATAACT	35	0.0016354193	37.889698	15
TGCGATA	40	0.0022347183	35.553783	46
ACGGCTT	85	0.0025127297	34.692616	70