FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005758783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005758783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92039792
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG4401250.09.165483140-144
GATCGGA4009200.09.07016140-144
TAGATCG784700.08.851746140-144
ATCGGAA3742950.08.5162735140-144
GAGATCG2186250.08.075823140-144
CAGATCG1575450.08.050953140-144
CCAAAGT1647400.07.7612152
CCCAAAG2166900.07.6389521
TCGGAAG3696250.07.5070305140-144
AAGATCG1006200.07.3324666140-144
TATCTCG356850.07.1096053140-144
AAAGTGC1377400.07.0862134
CGGAAGA3578550.07.0143967140-144
AGAGCAC3425100.06.8376374140-144
CAAAGTG1729450.06.54371643
CACAACG763500.06.496889140-144
GAGCACA3435550.06.306782140-144
CCCAAAT1014650.06.30225851
GCACACG2371700.06.296918140-144
GGCTAAT481650.06.2664691
Produced by FastQC (version 0.11.5)