FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005758833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005758833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110589534
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT252950.07.174111494
TCGTATG232250.06.57874694
TATGCCG183550.06.275194694
CGTATGC207950.06.17190594
AATCTCG358150.05.97257994
TCTCGTA294700.05.966325894
ATCTCGT359000.05.2185592-93
Produced by FastQC (version 0.11.5)