EGAF00005759121 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005759121
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1165478
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	1583	0.13582409963980446	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCAC	1476	0.12664331716257193	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	1462	0.12544209328704617	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAAT	1408	0.12080880119573258	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	1334	0.11445947499652503	No Hit
GGGCAGCGCTGGGTGCTTTATTTCCATGCTGGGCGCCCGGGAAGTATGTA	1326	0.11377306135336746	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1980	40.19082	1
GTATCAA	5105	39.836544	1
TATACAC	430	37.96362	3
TTATACA	455	35.877705	2
GTAGTTT	615	35.64022	70
TCAGTAT	445	34.63343	32
GTGGTAT	740	34.46718	1
AGTATCG	140	34.33467	34
GTATCTC	215	33.592945	35
TGGTATC	760	33.56159	2
CTCGTAT	170	32.583168	39
CTTATAC	460	32.529022	1
TATCAAC	6280	32.384438	2
AACGCAG	6315	32.204952	6
ATCAACG	6320	32.179474	3
TCAACGC	6325	32.100266	4
CAACGCA	6335	32.049595	5
CAGTATC	455	31.648296	33
ACCGATC	490	30.617588	27
CACGAGA	515	30.388773	21