EGAF00005759424 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005759424
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	538725
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2228	0.4135690751310966	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	988	0.18339598125203027	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	774	0.14367256021161073	No Hit
CTGTAGCACTGTCTTCATCACAGATATTGCTCTGGGTAGCAGTAACTATC	746	0.1384751032530512	No Hit
GGGTAGCAGTAACTATCTGATTATCCAGCTCCACTTCTGTAGGATCACAT	737	0.1368044920877999	No Hit
GTATGGTAGCTCCCCTCCGCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCAT	695	0.12900830664996055	No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT	693	0.12863705972434916	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	652	0.12102649774931552	No Hit
GTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATG	649	0.1204696273608984	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	631	0.11712840503039583	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	608	0.11285906538586477	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	599	0.11118845422061349	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	573	0.10636224418766532	No Hit
GTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGC	567	0.10524850341083114	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	561	0.10413476263399694	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGATTG	20	0.007557389	51.39924	33
TATCCCG	40	5.4460827E-5	42.502666	12
GGTATCA	530	0.0	39.78347	1
GTATCAA	1260	0.0	38.326984	1
CGGTTCG	45	1.0027542E-4	38.320885	39
CCTCGTT	85	1.2525902E-4	36.89273	70
GTGTATA	215	0.0	34.799343	1
TGTTAGA	400	0.0	34.4947	70
TATCAAC	1370	0.0	34.24397	2
ATCAACG	1365	0.0	34.12035	3
TCAACGC	1385	0.0	33.627636	4
CAACGCA	1420	0.0	32.798786	5
ATTGTCG	45	0.0035845	32.29903	65
AACGCAG	1445	0.0	32.234325	6
AATCACG	80	0.004139444	31.358816	70
AGAGTAC	1595	0.0	29.631956	11
CGTATAT	110	2.4072506E-8	29.466694	62
CTCGACC	50	0.0058487793	29.22278	66
CGCAGAG	1620	0.0	28.964783	8
TGTATAA	225	0.0	28.707582	2