EGAF00005760693 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005760693
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	333823
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	711	0.2129871219179026	No Hit
GGCTTACAGTTTCCCTCCGACGTTCGGCCAGGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCAT	656	0.19651132486377512	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	568	0.17015004957717114	No Hit
CTGTAAGCCTGTTGACAATAATAAGATGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGAAATCTGTC	516	0.1545729323623597	No Hit
GTGCAGCCACAGTTCGTTTGATTTCCACCTTGGTCCCCTGGCCGAACGTC	477	0.14289009445125112	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	473	0.1416918546654964	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	458	0.13719845546891618	No Hit
GTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGC	454	0.13600021568316145	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	427	0.12791209712931703	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	415	0.12431737777205286	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	404	0.12102221836122735	No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT	390	0.11682837911108582	No Hit
AGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTC	365	0.10933938045011876	No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT	363	0.10874026055724141	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	355	0.10634378098573197	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	337	0.10095170194983569	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGAAA	25	0.0017834345	73.9892	70
ACCTATA	20	0.007476362	51.53531	10
GCGGCAT	60	0.0010958759	41.10511	70
GTATCAA	730	0.0	36.75413	1
GTGGTAT	105	1.6370905E-11	36.036102	1
CCGAGTT	50	1.690534E-4	35.060608	59
TGGGTTA	40	0.0026335367	34.392937	23
TATCAAC	800	0.0	33.088318	2
CAACGCA	805	0.0	32.8631	5
ATCAACG	820	0.0	32.690723	3
TCAACGC	845	0.0	31.312138	4
AACGCAG	840	0.0	31.084791	6
GGGTATC	45	0.004685343	30.576084	1
CGAGTTC	60	4.8650228E-4	29.279835	60
AGAGTAC	920	0.0	28.394527	11
GTAAGAT	50	0.0073800054	27.8611	49
CGCAGAG	940	0.0	27.777899	8
CGGGGTA	50	0.007495603	27.772545	45
GGTAAAC	50	0.007697095	27.62204	35
ACGCAGA	950	0.0	27.4855	7