EGAF00005760792 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005760792
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1334005
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	2224	0.1667160168065337	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCAC	2216	0.16611631890435194	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	1974	0.1479754573633532	No Hit
GTATCAACGCAGAGTACGGGGGAAGGCGCTTTGTGAAGTAGGCCTTATTT	1589	0.11911499582085525	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAAT	1551	0.11626643078549181	No Hit
GGGCAGCGCTGGGTGCTTTATTTCCATGCTGGGCGCCCGGGAAGTATGTA	1458	0.10929494267262867	No Hit
GTATGTACAGGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	1428	0.10704607553944702	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2450	0.0	44.064785	1
GTGGTAT	735	0.0	43.83164	1
TGGTATC	770	0.0	42.71988	2
GTATCAA	6040	0.0	39.152485	1
GTTCGCC	45	1.0388952E-4	38.096394	26
TATAGCG	50	1.9378937E-4	34.2649	2
ATCAACG	7215	0.0	33.006386	3
TCAACGC	7310	0.0	32.57744	4
CAACGCA	7390	0.0	32.225983	5
AACGCAG	7570	0.0	31.504974	6
TATCAAC	7600	0.0	31.24418	2
CGCAGAG	7880	0.0	30.215284	8
AGAGTAC	8210	0.0	28.833874	11
GCAGAGT	8265	0.0	28.766346	9
CGACCGT	60	5.562782E-4	28.62491	32
CAGAGTA	8340	0.0	28.466581	10
GCGCATT	50	0.008006568	27.405756	16
ACGCAGA	8750	0.0	27.32848	7
GAGTACG	6305	0.0	26.732023	12
GTATCGG	90	7.296743E-6	26.644485	14