FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005761284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005761284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences156
Sequences flagged as poor quality0
Sequence length20-76
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCC21.282051282051282No Hit
GAATAAAAGCAGAGTAATATTTTTTTAT10.641025641025641No Hit
CAGCGGAGAGTAGTGTTTTT10.641025641025641No Hit
CATCAAAAAACTCACCAGACTAAAATTATAATATAACTCTCCCTTTAACC10.641025641025641No Hit
TATAAACAAAGATTAATAATTAATTTTATTATATTAAAATAATTAAATAA10.641025641025641No Hit
GCAGAGTACTATTGTTTTTTTTTTTATTTTTTAGAGGAAAGTGTTGATAT10.641025641025641No Hit
CAAAAAAAAATATGAAAATTCAAAATAACAGTAAAGTGGACATCTCCTTGGTCGCCGTAAAATTATAAAAAAAAC10.641025641025641No Hit
GAAGAGAACATTTGTTTTTTTTATTTATTTTT10.641025641025641No Hit
AAGATAATCTGTGGTCAGTGTGAGCTTTGTCTTGATTTAGGAGGAGGAAA10.641025641025641No Hit
CTTAAAAACATATCAATCAGCATTCAAAGAACATATAAAATATATAGAAAAT10.641025641025641No Hit
CTAAAACAAAACAAACCATGACTACAATGACTATACACAAGCTCTATCACAATACAGA10.641025641025641No Hit
CAACTGCCTCATCCTAACAAAAAAGAGCAAAAGATCACTCAAGAACACAA10.641025641025641No Hit
CTAATCTATTATCAACCCCTTAGCCATCATAAACTCACTAATCAAGATGATTCACCACCCCGAAGCCATAAAACC10.641025641025641No Hit
GCAGAGTTCACAATCCCACCTGCCTATGTCACTGGTAGTCAGGTGGGAAA10.641025641025641No Hit
CAGTGACTGCTTCGGAGCTGCCTGGCTCATGGGCCAACCCCTTTCCCGGACCCCCCAGCTGGCCTCTGAAGCTGG10.641025641025641No Hit
CAGATCGACATAGCCGAGATCATCACGGGAACAGGACAACACAAATATGC10.641025641025641No Hit
GGGAAAGAAGTTATGCTTGTTGGAATTGGTGACAAAATCAGAGGCATACTTTATAGGACTCATTCTGACCAGTTT10.641025641025641No Hit
CTTATACACAGCAGGACCCTGCCGACGCGGAGGATAGAGTAGATATCGGTGGACGACGTATAATTAAAATAAA10.641025641025641No Hit
GAAACACAGCACATTAATTTAATTATAAATTTTTAAAATTATATAAAGTGAAG10.641025641025641No Hit
CTTGTGGCTCGTGTCCATCTTGCAGGTGGCTCTTCCTCCACATCACGACT10.641025641025641No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.641025641025641No Hit
GATAGGACCAAAAGTAGATTTGATTAATTTATTAGTTAATAATATATTTCCC10.641025641025641No Hit
AAAAAACACAACTCCCTAATACCACCAATATAGACATAAAAAAAAAGTTC10.641025641025641No Hit
ACTCACCTCAACGCGCCGGCGCCTCCCCGCTACCCCCCATAAAAACCAAACACCAGAAACATTAAACAATCAGCC10.641025641025641No Hit
AAACATACGCTAACTACTAAAATAGATCAATATATATCATAAATAGACTT10.641025641025641No Hit
ACCCAGAGTTCTTATTTTATATATT10.641025641025641No Hit
AATATACACAACAAAAAATCACAACTGATCATTAATATAATATCTTGATA10.641025641025641No Hit
GATTGATGCAACCTAATCACATAACTGTGATATAGGGAAGTTGCAAAGTGAATTTGTTCATATGTGCT10.641025641025641No Hit
AGTTAGGAAAGGCCGAGAAGTGCGGGCGGAGCCGCCCGCGCCCTCCGCAA10.641025641025641No Hit
CATAAACAAATATTACGAATAATACCCCTCGACTCTGAAGAACAAGGACTTAGACAACTAATTAAAATACATGAG10.641025641025641No Hit
GCCCAACATCTCTCTCCCAATAAAGATGCAGCGGTGTGGAAAAAAGGTCACCATACAAGCGAAGCAAGCAGGCTC10.641025641025641No Hit
AAAATAACCAAAAAGCATATAAAAATACAAATTAACTATTTTTTATAAGA10.641025641025641No Hit
GTTTGTGTTTCTCGTAGTCTGTTTTGCTCAGCGTCAGGGTGCTGCTGAGGCTCTAGGTGCTGTCCTTGCTGTC10.641025641025641No Hit
CATCTTAAGAAACAAACTAAACCCAAAGAAAACCTCACCTAGCAACCAAA10.641025641025641No Hit
GTACTGATTAATTTTATTTATTTTTTTTTTTTTATTTTTGTGCACAGCAA10.641025641025641No Hit
TAGCTGAACACCAATTAAAAAAGAATAAGCTACATACTACTCGAATAGTC10.641025641025641No Hit
TCAATAGGAAGTGCATCTAAATCGGATGAAAGCAGTACTGAGGAGACTGA10.641025641025641No Hit
GGATCAACCCAAAAAACATTATTATTATTGTTATTTAGTATTTTTAAGCAAGCTTCGAGCACCGTGGAGGAAA10.641025641025641No Hit
GCAATGAACGTAAAAGCTAATATAGTTTTGGTAATTGTGCTGTGGCGCCCAGGTGAAAAATGTGACATCCAG10.641025641025641No Hit
GTAAGGGAAGCCGCAGTGGAAAAACCTTTAGGAAACTGATTGTGATTGATTGAAAATATGATGAAGAATTTTT10.641025641025641No Hit
GTCGTATCAACACAGAGAAAAATTAAATATAAAATAAAATTTTATTTTTT10.641025641025641No Hit
TAGTTAAGTGGGATCGAGACATGTAAGCAGCATCATGGAGGTTTG10.641025641025641No Hit
GGTATCAACGCAGAGTACGGGATTGATTCTATTCAACTCCCTTACTCTCC10.641025641025641No Hit
AAAATCAACATCATACTCACCCCAAGAAGATGAAACAGAAACTCAAGGTGATCTACCAATCAAAACTAAAAAAA10.641025641025641No Hit
CATATGAAATAAAAACTCTGCCTATTAAAAGTAAAATGAAAATATCTTTGCAACGAAAATATTAATTTAATTCAA10.641025641025641No Hit
GCACTCACTCTCCCGACTAAGAATGGTTATGAAATAGCTTGACGAAGATA10.641025641025641No Hit
CTGTCCAGATAGGGAAGACAGAATTTGACAGCCAGTGGAAAGTGTGGCAG10.641025641025641No Hit
GAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.641025641025641No Hit
ACTTCAGAGTGTCCTAGAGAACCTCCCAGGTGTGG10.641025641025641No Hit
GTGCAGGGCCGTTCAAGGATGCTGGATCAGGTGTCCCGGGCCAGGCCAGG10.641025641025641No Hit
AATATAACCATTAAGAAGACTCCTTAAAATTATATATATGTTGTAAAACTAACATAAAAAAAAAAACAAGGGATT10.641025641025641No Hit
CTCCCAGATCTGTGCAAAAGCAGTGAGAGATGCACTGAAGACAGAATTCAAAGCAAATGCTGAGAAGACTTCTGG10.641025641025641No Hit
CAACAGCACCAACCTCATAATAGGATAATCTAGAGACACCTCCTACAACTCACATTAAAAAACAACAGAGCTCT10.641025641025641No Hit
GTGCAGGACCAGGAAGACAGGTTTTTAGTTTTAAAAATGGTTTTGTGAGATTTTTAGGAGGAGTTGT10.641025641025641No Hit
ATACAAAGCATATAAACAACAGTCCATGCAGAAAAACAAGAAAGAATACT10.641025641025641No Hit
CATATGCCTCTGAAGACTCACAGCATAATAACTAAAAACCAAGAGACCCAAAAATAAACAAGAACCTGGATAA10.641025641025641No Hit
CAAAACACAAAATGAACATACCAACACCAACATACATAACTATCAATCATTAATCCTAATAATTCAAATAATATG10.641025641025641No Hit
CCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTGGA10.641025641025641No Hit
GTAGGAGTATAGAGATGCCCGGGCTTACGCTCCTCAGCGGATCTGGCAGC10.641025641025641No Hit
GCTGTGGCCGTTGCAGTGGGGCTGTCAGTTGCCTCTGGGACCCCCTCCCCAGGGAAACACAGAGTTACTAGCAGA10.641025641025641No Hit
CATAATACTAAGCCCAATACAACAAACCTGAAAAACAAAATTGTCTCCTA10.641025641025641No Hit
CAACTAAAGATGCCGAAGATTAAACAAACTGATTGAAATTTTCTACAATATACAAAAAAAATTTATTATCTTTGT10.641025641025641No Hit
GAATGGAATGCAATGGAATGGAATTATCCGTTATGGAATGGAAAGGAATGGAATGGAATGGAATGGAATGGAATG10.641025641025641No Hit
GGGTTGCCCAGGCCCCTTTCTCCCTTTGCCTCCTCCTCGGGCCCCCAGACGCCTCAGTGCCCCAGCCA10.641025641025641No Hit
AAATTATCACAGCACTCTATTAATAATCCAATATACCTCAATTCCACATA10.641025641025641No Hit
GAGCTAAGACAGCTCTGGTGAAACAGTAATAGAGGGAGGAGGAACACGAGGTATTCATGTCTGGGCCAGAGCTGC10.641025641025641No Hit
GTACTCGGAATAATATTTATGGTTAGATTTTTTTATAAAGTAGTGAGAAATGTTAGTTTTACACAA10.641025641025641No Hit
GAGATATTACGCCAAGCCAGATTCGGGCGCTCCCATCTTGAGAAAGTTGGTCACGTGTTCACAAAATTCTTTAAT10.641025641025641No Hit
CAACTACACCGACAAACGAATACAAATCTTAAACTCAAACATACATCCCAAAAAATAAATAAAACAAGGCGAC10.641025641025641No Hit
ATAAACAAATCAACCTGCCCAACAATCCTTAACTGAAAATATATGACCAA10.641025641025641No Hit
CTATCAATTCTCCCTATTTATTTTCCAAAATCCAAAAAATCAAAAAAAGG10.641025641025641No Hit
ACAATACCCACTACAAGAAACAACAAAATGCACTTACTCTGCATATCCAA10.641025641025641No Hit
CAACAGACCATGCAGAACACTACTCGACACAATCTATCAGACTACGCAGAATAATAAAAAAAAAACGCCGTTT10.641025641025641No Hit
AATTACACCCCTGTGATTGTATTGGAGATAGATTCTTTAAGGAAGTGATT10.641025641025641No Hit
GTGTATATCCAGAATATCAAATAACTCAATTTTGATGACACAAAGGGTAAGAGAAAGCAAGCAATAACTGAGAAA10.641025641025641No Hit
GTAAGAAAGCAAAGAGAAGAGATATTTGTCAAAGCGAGAAGACCCCATACCTGAATGATGCCACAGAGTAAAT10.641025641025641No Hit
ACCTCCTCCTTAAATAAAATTATTAAAATATATAAAAAGAAAAAAAAAATAAAAAAAAAAATTCAA10.641025641025641No Hit
GCTTAGACGTAAATTATGGCTGAATCATCCGCTACCTTCACGCCAATGGC10.641025641025641No Hit
CCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAGTCACACGAACTGTGGCTGCACCATCTGTCTTCATC10.641025641025641No Hit
AACATATTTATTGCTATTATAAAAGACTACGACCAAAAAGAAGACTATTACCCACAAAAAAAAGAAAAAG10.641025641025641No Hit
CTTAAAAACTCAGCAAACAAACAAAAAAAAACAGATACACATACGCACATTTATAAGATTGAATTAAATGAAGTT10.641025641025641No Hit
ACACGACACGTACTACGTTGTAGCTCACTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATCATAGGAGG10.641025641025641No Hit
ACAGGAATGTGTCTGTCAAGGAGGTTCGGCGTGGCACCGAAGCACGGCACAGCAAAAATCACGCTCCAATGCA10.641025641025641No Hit
CATATACCCCTCCAGACCCATCACTAATTGTAGATCACTCTCTAAGCCCA10.641025641025641No Hit
GTTATACACATCTGACGCTGCCGAGAATAGAGAGGTGTAGATCTCGGTGG10.641025641025641No Hit
GCCGTGACCCTGCAGCGCCGAGTCCAGCCTAAGGTGAACGTTTCCCCCTC10.641025641025641No Hit
TAAGACCCAAGACCCCACTAGGATACAGAAGCACAAGCAGCAATCCTTCA10.641025641025641No Hit
GCACTGTACACGGCAGCAGTGGCACCCACCCTTCCATGGCTTGTGGTGCGAGTCTTCAAGTGTCTGTGGATGCGG10.641025641025641No Hit
GGCTGAGAGGGCGTAGGAATTATATCCTTCTTGCTCATCAGTTGATGATA10.641025641025641No Hit
CATATCAACAACATCATCAACCCCCTAATCATAAACACAAGCTCACTGTG10.641025641025641No Hit
ACCAAACCCTATCTGCTCCAAAATCTGCAATTTTTTGTTTGTTTGTTTGT10.641025641025641No Hit
GCACACAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGA10.641025641025641No Hit
GAAAGGAACATAAAGAAAACGAATAAACTCTATAGCAATGTAATGGAATGAAAATGAAAAAAATCAAAAGCAAA10.641025641025641No Hit
GGACAAGGCAAATGATTTCTTCAAAACACCCATTTTCTTACTGGAAGTGG10.641025641025641No Hit
CTCCAGAACAGAGATCAGTTTCTGTTCGTAAATCACTAAGTCTGTGGGATTCTGTTGCAGTAGCGCAGAGGATGA10.641025641025641No Hit
CCATTCTCTTCCCTTCCCTTACCAAGCGAACCCCTGAATTCTAGCTGAAT10.641025641025641No Hit
CATATATATCACCCTCAGAAAACAAGCATGTACAGGACCCTCTTCCACAG10.641025641025641No Hit
CTCCAGCAACTGCCCCAAGGCCATGCGGCGCCTGCTGTCTGCTGGCTCTT10.641025641025641No Hit
ACTTAATCATTGCCTAAAGAAGAGAAAATTATCCCCAAAACGTGCTTAACCAGGAGGCCAATGCATTTGCCGAC10.641025641025641No Hit
TGCTCAGCCCGCCTCAGCCACCCAAAGTGTTGGGATTACAGGTGTGAGCC10.641025641025641No Hit
ACCAACCTACAAAGAGAGCACACGTACACACCTTATCCAGGATCAAAATAAGGATAAAAAGGGAAATCAAAAAAA10.641025641025641No Hit
GTGTGAATTTTTCCCCCGCCAATCTCTCTAGCACTGGTTCAAGTTATCTGAATGCTTTGGTTGACAGTGCGGTGG10.641025641025641No Hit
GCAAAAAACCACCCTGCATAGACTAAGCAATAGACATCTAAATAAGGGAAAATGCA10.641025641025641No Hit
CAACACATCATGCGAACCCGCGCCGTCCAGACGAGTCGAACTCGCACTTC10.641025641025641No Hit
GAAAAGCATTAGCCATAAACAAGAAGCCATCCCAATAATCCTTTAAGATGAACATCACATCATAAAAATTCTAA10.641025641025641No Hit
CAATTAGGATCAACTTAATTAAGAAAAATTATAAAACCTATCATATCAATATTCCAACTTAAAACAAAATATAC10.641025641025641No Hit
CGCCCAGACATGGCGGACGGCAGCGGATGGCAGCCGCCTCGCCCCTGCCAGGCCTACCGCGCCGACTGGAAGCT10.641025641025641No Hit
GTGGTGCACACTTATGGAGGCTGCAGCAGGAGGATCCTATGAGCCTGGGA10.641025641025641No Hit
CTTCAACACATCTGAAGAATCCCACAAAACTAAACTGTATAAATCGATGGTCCCAGAATCATTAAAAAAAAAACC10.641025641025641No Hit
ATACACACTCATAACAAGAAAAACTAGCTCAAGAAAAAATAAAATCTCAT10.641025641025641No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT10.641025641025641No Hit
GCCGGGGCCAGCGCCAGGCGCTCGGCCGAGTGCACGAGGTCCAGCACCGCGGACGGCCGCGCCGCCTCCAGGCG10.641025641025641No Hit
GAGTACGGGTGCCTGCGGGGCGTAAAAAAAAAAAAAAAAAAAAAAAAAAA10.641025641025641No Hit
CCTTTATTTAAGAAATAACATTTTGCAAGACATAGCTGTCATAGGTAATG10.641025641025641No Hit
AATTAAATCACAACAACTCGGTAGTCCCAGTCACAAAAACAAAAAACCAG10.641025641025641No Hit
GAGATGCATAACTATTACCCTGTTGGAGAGTTAGGATTATGACTATTCTT10.641025641025641No Hit
AAATTTATGCATGCTGATGCCAAGTTGTTCACACATTAATGCTACTGGGT10.641025641025641No Hit
AGGCCACACCCGTGGTCACTCCGACTTCGCAAGCTCCATCTCAAAAAACAACATCGTCTCCACCTCACTGGATGA10.641025641025641No Hit
AATAAAGTCATATTCCATAAAAAACAAAAAAAAATTAACAACAAAATCGAGAAAATATAAAACAAACAATTAT10.641025641025641No Hit
AATCACATTACAATATTTATAATTTTATTTTATTATAAAAAACAAACCAAAAAATAAAATAAAAAAAAAAAA10.641025641025641No Hit
CAGATCACGTAGGACATAAATCATTGAACAAACGAACCTATAATAACGGCTGCACCATCGGGATTTCATGAT10.641025641025641No Hit
AAACAAAAATCCCAAATCATCAAACAAATAAACAGCACTTAGTCGAACAA10.641025641025641No Hit
AGCTATGACAGCGTCCAGGTCAGACGGATGGGTGACTAGACCCATGGAGAGGAACTCTTCTGCACTCTGAGCTGG10.641025641025641No Hit
GCAATGTATTCGGCTACTGGCAGAGAATTGGCGATGCAACCGCACAAAGCCGCCCCCCCATACAAGCTCCGAT10.641025641025641No Hit
CATCTGCCTCTCACTAACAAACCAAAAGTAAAAAACAAACAAATACCCAAAACAATAAAAAAAAACAGCAAGGCC10.641025641025641No Hit
CAAATAAACATTCCAAATACTACTTACTTTAATAAATCCGTTAACTACGC10.641025641025641No Hit
CATCAATACCTAGTGCCTCAAAGGCATGGCCTAAGCATTGACTGACTTAGAGTAAC10.641025641025641No Hit
AAAAACAAAAAAAAAAATAAATAAATTTAATATTTTAAAAAAAAAAAAAA10.641025641025641No Hit
GAATTAGAGAAACAAAAAACTCTGGACCAACATGATATCAAAAAGGACCACACTCACCATCAG10.641025641025641No Hit
GGCCAGAGGATCACTTGAGCCTAGAAGTTTGAGACCAGCCTGGGCAACAC10.641025641025641No Hit
AGTATACCCCCGGTCGTGTAGCGGTGAAAGTGGTTTGGTTTAGACGTCCG10.641025641025641No Hit
GAGTAGGGCCGCCTCGGGGCTGGGCATCCGGCCCCTGGGGCCACCCCTTG10.641025641025641No Hit
CCACTCCGGAGGAACTGGGCCTTGACAAAGTGTAAACCGCATGGATGGGCTTCCCCAAGGATTTATTGACATTG10.641025641025641No Hit
GTAACCGAAAACCCAGCAGACTCAGACACAGAGTGGCCATTATACAGAAA10.641025641025641No Hit
CAACTAACTCTTACGAATAACAGCAAATACTAGATAACTCAGTTCCCCAA10.641025641025641No Hit
CATAACACCAGCATAAAATTAATTATTAGATGATACTGAATCTCTATGTT10.641025641025641No Hit
CGCATAGGGCGTGAGGTCGTTCAGGCCGACGACCGGCTTCTTCGTCAGCGGATGCCCCTGTCGCACCACCACGCG10.641025641025641No Hit
CTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTGCCCACTTCTGGAAGGTTCCATC10.641025641025641No Hit
CTCTAATAAATAAAAGCAAAAATTGGCATAATTGAAATCATCAATCTCTTGAACTCGACCCAATTTAATATTAAT10.641025641025641No Hit
CAACAAATCCAAACACAAAACCAAAGAAAACACACACAGCCACAATCACC10.641025641025641No Hit
ATGCTTCATTGAAAATCATATATGGTTCTGAACACACTACAATTTATGACAATTATACACATCTGAAGCTGCATA10.641025641025641No Hit
GTAAACAACTCACAGTACTTAAATTTTAAATATATTATTTTAAAAAGAAAGATAGAGCCAACTGAACCCGATTGT10.641025641025641No Hit
AAAAAACACATATGTAGATAACAACCATCATCATATTTAACATATACAAATAAGACGAATCCTAAAAAAAAAACA10.641025641025641No Hit
CAACAAAAGATAAAAAAAAAGAGAAAACAAAAAATATATCATGAATAAAT10.641025641025641No Hit
GTCCGAGTAACGTCGGGGCATTCCGGATAGGCCGAGAAAGTGTTGTGGGA10.641025641025641No Hit
GTATCAAGGCAGAGTACGTTATTGTTGTTTTTTTTTTTTTTTTTTTAGGCGCAAAGATT10.641025641025641No Hit
GGAGGGGACAGAGGAGAGAATTCCACGCAGACACAGCAAGTAAGCGTGGC10.641025641025641No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC10.641025641025641No Hit
GTTAAATAAATATATCTCAATATCTGCAGACAGCAGCTTCGTTATACAGC10.641025641025641No Hit
ACAGGAAGAGCATCGAAGATCATATGGTTGTTATGGTTATTGTATTGGTA10.641025641025641No Hit
CACCAGGGGTATGGGAAGTGAAAGTGAACCTGCCCTCGGAGCCATACTGC10.641025641025641No Hit
GTATAAACGCACAGAACGTTATTTTTTTTATTTTTTTTTTTATCTCGGTGATCGACGTATAAATAAAAAAAA10.641025641025641No Hit
CATTCAGACTTGTCTTTCAGCAAGGACTGGTCTTTCTATCTCTTGTACTACACTGAATTCACCCCCA10.641025641025641No Hit
ATCTTTGTCAGCAGTCACATTGCCCAAGTCTCCAACATGCCTCTCTTCAT10.641025641025641No Hit
AAAATACACATATGCCACTCACCAAAATACTTATACTCAAGATCTCATAG10.641025641025641No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTTTTTT200.051.99999670