FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005761292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005761292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences654450
Sequences flagged as poor quality0
Sequence length20-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAGACAGCCGTGTCCGCGGCGGTCACAGAGGTCATCCTCAGGGTAA14070.2149896859958744No Hit
GTCTATTACTGCGCGACCGACACACTAGGGTTTTGTAGAGGTGCCATCTG12700.19405607762243104No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11110.16976086790434716No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT10920.16685766674306668No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT10830.16548246619298648No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT10260.1567728627091451No Hit
GTCTCTGGTGGGTCCTTCACTGCTTACTACTGGCGTTGGATCCGTCAGCC9400.14363205745282298No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC8760.1338528535411414No Hit
CTGTTATAGTTCTGACAGTAATAAGTTGCAACATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGAAATCTGTC8150.12453204981281993No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT7850.11994804797921918No Hit
CCATAGATCAGGAGGTCAGGAACTTTCCCTGGTTTCTGCTGATACCAGGC7720.11796164718465887No Hit
GTTATAGTTCTGACAGTAATAAGTTGCAACATCTTCAGGCTGCAGGCTGC7590.11597524639009855No Hit
GATCTATGGTGCGTACATTTTGCAATCAGGGGTCCCATCTCGGTTCCGTGGCAGTGGATCTGGGACAGATTTCA7510.11475284590113836No Hit
GTAGGGGACAGCGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTCGTTAGCCTGGTATCAGCAGAAA7500.11460004584001833No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC7290.11139124455649782No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG6990.1068072427228971No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC6800.10390404156161662No Hit
GTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCGGCTCCCAAATGGGTC6690.10222324088929637No Hit
CTATAACAGTGCCCCTCGAACGTTCGGCCAAGGGACCAAGGTGGAAATGAAACGAACTGTGGCTGCACCAT6660.10176484070593629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)