EGAF00005761365 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005761365
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	367387
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGT	1549	0.4216262415382145	No Hit
CTGTAAGTCTGTTGACAGAAGTAAGTTGCAAAATCTTCAGGTTGCAGACTGCTGATGGTGAGAGTGAAATCTGTC	1032	0.2809026993334005	No Hit
GACTTACAGTGTCCCCCATTTTTTCGGCCCTGGGACCACAGTGGATATCAGGCGAACTGTGGCTGCACCAT	842	0.22918611709178607	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	676	0.18400215576490186	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	669	0.18209680799810554	No Hit
GTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG	534	0.1453508153527479	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	479	0.1303802257564911	No Hit
GTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGTATTAGCAG	438	0.11922033169382694	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	438	0.11922033169382694	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	422	0.11486525108400678	No Hit
GGCGTAGAGTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	407	0.11078236301230039	No Hit
GTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTT	404	0.1099657853979591	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	400	0.10887701524550406	No Hit
GATCAAGAGTTTAGGGGCATTCCCTGATTTCTGCTGATACCAATTTAAAT	380	0.10343316448322885	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	376	0.1023443943307738	No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG	374	0.10180000925454628	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATACAC	240	0.0	49.696945	3
TTATACA	270	0.0	45.402145	2
AAGGGGG	320	0.0	43.165173	69
TCGTATG	275	0.0	42.603607	40
TGCTCTA	35	9.6093345E-4	42.227333	58
ATGCCGT	295	0.0	41.393192	44
CGTATGC	305	0.0	40.788177	41
CTTATAC	295	0.0	40.43141	1
CTCGTAT	285	0.0	39.787	39
ATACACA	310	0.0	39.538425	4
TATCTCG	270	0.0	39.076935	36
TACACAT	315	0.0	38.910828	5
GTGGTAT	145	0.0	38.843586	1
GTATCAA	780	0.0	38.65318	1
ACGAGAC	315	0.0	37.900455	22
CCCATAC	35	0.0016429978	37.86434	1
CTTGAAA	340	0.0	37.846043	57
TGCCGTC	325	0.0	37.685726	45
AGCCTAT	300	0.0	36.927	32
ATCTCCG	335	0.0	36.587795	10