FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005761372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005761372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences793097
Sequences flagged as poor quality0
Sequence length20-76
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20010.2523020513253738No Hit
CTGTAAGTCTGTTGACAGAAGTAAGTTGCAAAATCTTCAGGTTGCAGACTGCTGATGGTGAGAGTGAAATCTGTC9820.12381839800175767No Hit
GACTTACAGTGTCCCCCATTTTTTCGGCCCTGGGACCACAGTGGATATCAGGCGAACTGTGGCTGCACCAT8070.10175300120918375No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)