FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005761480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005761480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464191
Sequences flagged as poor quality0
Sequence length20-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8180.17622056437974887No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT6320.1361508516968231No Hit
GTAATAAACGGCCGTGTCCGCAGCGGTCACAGAGCTCAGCTCCAGGGAGAACTGGTTCCTGGACGTGTCTAGTGA5590.12042456661158875No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT5320.11460799541568019No Hit
GTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCGTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTC4890.10534456721478873No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)