EGAF00005761519 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005761519
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	927682
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1408	0.15177614742983048	No Hit
GTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGAAACCA	1318	0.1420745470969578	No Hit
GTATAATGACTGGTTCTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCAT	1259	0.13571460910096347	No Hit
GTCATTATACTGCTGACAGTAATAAACCGCAAAATCTTCAGACTGCAGGCTGCTGATGGTGAGAGTGAAGT	1075	0.11588022619820153	No Hit
CTCCTGCAGGGCCAGTCAGGATGTTCGCAACAACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCT	1000	0.10779555925414096	No Hit
GTGTAGAACCAGTCATTATACTGCTGACAGTAATAAACCGCAAAATCTTC	961	0.10359153244322947	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	946	0.10197459905441734	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	885	0.0	40.83384	1
GTGGTAT	240	0.0	38.71923	1
GTATCAA	1915	0.0	37.023087	1
TATCAAC	2100	0.0	33.59583	2
TCAACGC	2145	0.0	32.730576	4
CAACGCA	2140	0.0	32.646233	5
ATCAACG	2155	0.0	32.578693	3
AACGCAG	2215	0.0	31.694494	6
CGCAGAG	2430	0.0	29.173485	8
TCGTATG	95	3.1166928E-7	29.143055	40
AGAGTAC	2445	0.0	28.994507	11
ACGCAGA	2470	0.0	28.561714	7
GCAGAGT	2560	0.0	27.69202	9
TGGTATC	325	0.0	27.532188	2
CAGAGTA	2610	0.0	27.161522	10
AGTACGG	2290	0.0	26.59899	13
ATTAGAC	65	8.7810546E-4	26.473259	3
GAGTACG	2315	0.0	26.311745	12
GTATAGA	70	0.00135248	24.58364	1
TACGGGA	1145	0.0	23.443178	15