FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005761648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005761648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469469337
Sequences flagged as poor quality0
Sequence length10
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGCGGTTT46129572998.2589687215291No Hit
TGCGCGGTTA24415270.5200610151883039No Hit
NGCGCGGTTT16922010.36044973902097466No Hit
GGCGCGGTTT16906150.36011191078066085No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)