FastQCFastQC Report
Thu 12 May 2022
EGAF00005761653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005761653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences379296642
Sequences flagged as poor quality0
Sequence length10
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCGACAAGC31741982983.68643268927227No Hit
GTCGACAAGC5763043515.19402721208378No Hit
ATCGACAAGC10797260.2846653200794749No Hit
NTCGACAAGC9120640.2404619232036333No Hit
TTCGACAATC3912090.10314064420322497No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)