FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005761657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005761657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences235763225
Sequences flagged as poor quality0
Sequence length16
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAGCGAAGTAAAGGG17055370.7234109560555935No Hit
ACGTTACGTACCGTTG15133260.6418838222118823No Hit
TTTGCTGAGAAACCGT12957540.5495997096239246No Hit
CGAGTTTGTCGCATTG11284880.47865310631036706No Hit
TTACTGAGTTAAAGCG11072450.4696427952238946No Hit
ACATGCCTCAATCCAT10878510.46141674555054124No Hit
AGGTTTGCATTAGCGA10349820.43899212864941084No Hit
CGTAATAAGCTATCGC9054050.38403147904004115No Hit
CTCATAAGTGTTAACC8876360.37649468020298754No Hit
AACGGATTCAAACTAG7280720.308814913776311No Hit
CCTTTATGTAGGTTTC7177460.30443509584669115No Hit
TAATCCGTCACAAAGC7167400.3040083965597264No Hit
CGTATTTAGCATCTAT6900590.292691534059224No Hit
TGGACCAAGGCAATAC6435110.2729479968727099No Hit
GATCCTTCAACCGCCT6122430.25968553831921837No Hit
AGGCTTGAGGAACAAG5846230.2479703948739249No Hit
CCAAGGATCTAGCCAC4640400.19682458958558952No Hit
ACAAGTATCATGTTGT4187160.17760021733669448No Hit
TACCTGATCGCTTCTT3957860.16787435784355256No Hit
CCGCCTAAGATTCAAG3945760.1673611310669847No Hit
ACTGAATCAAGGCTTA3636220.1542318569827843No Hit
GTTACCGGTTTGCTGG3540550.1501739722130116No Hit
GTAGGAGCACATGCAA3117770.13224157414711304No Hit
GCTAATGCAACAGGCT3066280.13005760334335434No Hit
ACCTCATCACGGATTA2867390.12162159726140495No Hit
TGCATTAGTTTCCAGG2759910.11706278619152753No Hit
GGTGCATCACATAACG2750300.11665517385079884No Hit
TACCCGGTCCTAAATC2540770.10776786752895835No Hit
GGAGTCGGTGCACAAA2479830.10518307085424371No Hit
CAGTAAGGTAAGGTGC2390940.10141276274109332No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)