FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005761659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005761659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences247416710
Sequences flagged as poor quality0
Sequence length16
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTACAACGTCTAACCG14925670.6032603860911415No Hit
CATTTGGTCGCTATGC12412690.5016916601954653No Hit
TGGTGAGTCCAATTGT12323450.4980847898268472No Hit
CATTGCGGTTGACCAT11754390.4750847264924023No Hit
TAGCGGTCAGTATGTG10634740.4298311136705358No Hit
AGGGCCTAGCAATACA8398400.3394435242470082No Hit
TCACTGTCATGGTGAC7993760.32308892960382507No Hit
GGGTTGCAGGCTAGCA7907600.3196065455724474No Hit
GTCGAAGTCTATATGC7761160.3136877860836481No Hit
GGTAATGGTTAAAGAC6120110.24736041474320794No Hit
AATATGGTCATGCCTA6005850.2427422949727203No Hit
TAGTTTCAGCCTTAAT5541210.22396264181186468No Hit
CAGCCTGTCCAATATC5470710.22111319805359952No Hit
ACAAACGGTCCAATTA5104190.20629932392197764No Hit
GCGGTAGGTTGGTGAA4169660.16852782497997004No Hit
GTTTGGTGTGGACATA4142660.16743654864701743No Hit
TGAATCTTCCGTTATG4134970.16712573698033573No Hit
AGCCAATAGCCTGTCG4034900.16308114354927766No Hit
AAGGTTATCCGGATTC4024700.16266888360127332No Hit
TTTCTTGTCCCGCTGA3918970.15839552631671483No Hit
CTACCTAAGCTTGTTG3869760.15640657415580378No Hit
CTTCCTCCAATTAGCG2582640.10438421883469391No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)