Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005762457 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3354076 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGAGTAG | 1295 | 0.0 | 42.459763 | 3 |
TACTCGG | 1035 | 0.0 | 41.774273 | 3 |
CCGAGTA | 1350 | 0.0 | 40.408905 | 2 |
CTACTCG | 1075 | 0.0 | 39.371952 | 2 |
GCTGGGA | 10475 | 0.0 | 38.404415 | 9 |
AGTAGCT | 5020 | 0.0 | 36.791733 | 5 |
GAGTAGC | 2985 | 0.0 | 36.683693 | 4 |
CCCAAAG | 7010 | 0.0 | 35.591736 | 1 |
AAAGTGC | 5825 | 0.0 | 35.337807 | 4 |
CCCGAGT | 1675 | 0.0 | 35.197086 | 1 |
CCAAAGT | 6330 | 0.0 | 34.843517 | 2 |
GCTACTC | 2560 | 0.0 | 34.63613 | 1 |
GTAGCTG | 5315 | 0.0 | 34.572826 | 6 |
AAGTGCT | 6035 | 0.0 | 34.186028 | 5 |
TAGCTGG | 5655 | 0.0 | 34.156284 | 7 |
TTGGGAG | 6625 | 0.0 | 32.631226 | 6 |
CAAAGTG | 6640 | 0.0 | 32.486732 | 3 |
AGTGCTG | 6285 | 0.0 | 32.452328 | 6 |
GTGCTGG | 6560 | 0.0 | 31.163544 | 7 |
TCGGGAG | 1520 | 0.0 | 30.609274 | 6 |