Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005762464 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3511959 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTACTCG | 1185 | 0.0 | 36.117683 | 2 |
TACTCGG | 1175 | 0.0 | 36.02479 | 3 |
CCGAGTA | 1165 | 0.0 | 35.526592 | 2 |
GAGTAGC | 2720 | 0.0 | 34.23582 | 4 |
CGAGTAG | 1105 | 0.0 | 34.050583 | 3 |
TTGGGAG | 6800 | 0.0 | 32.494698 | 6 |
GCTACTC | 2795 | 0.0 | 32.48136 | 1 |
AGTAGCT | 4230 | 0.0 | 31.909937 | 5 |
CCCAAAG | 6650 | 0.0 | 31.901686 | 1 |
GCTGGGA | 9100 | 0.0 | 31.762976 | 9 |
GGAGGCT | 7390 | 0.0 | 31.353783 | 9 |
GTAGCTG | 4350 | 0.0 | 30.802017 | 6 |
CCCGAGT | 1435 | 0.0 | 30.48525 | 1 |
AAAGTGC | 5565 | 0.0 | 29.663773 | 4 |
GGGAGGC | 9205 | 0.0 | 29.614052 | 8 |
CGGAGGT | 1535 | 0.0 | 29.397621 | 7 |
AACGCGC | 80 | 4.7831322E-4 | 29.374716 | 8 |
TAGCTGG | 4815 | 0.0 | 29.091711 | 7 |
CTCGGGA | 1555 | 0.0 | 29.035229 | 5 |
CAAAGTG | 6335 | 0.0 | 28.508963 | 3 |