Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005762494 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2933147 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTACTCG | 1225 | 0.0 | 56.827778 | 2 |
TACTCGG | 1315 | 0.0 | 53.296112 | 3 |
CGAGTAG | 1355 | 0.0 | 49.987133 | 3 |
CCGAGTA | 1525 | 0.0 | 47.190723 | 2 |
GCTACTC | 2985 | 0.0 | 45.546524 | 1 |
AGTAGCT | 5190 | 0.0 | 44.587997 | 5 |
CCCAAAG | 7085 | 0.0 | 42.82739 | 1 |
GAGTAGC | 3275 | 0.0 | 42.655277 | 4 |
AAAGTGC | 5640 | 0.0 | 42.53228 | 4 |
CCAAAGT | 6525 | 0.0 | 42.31483 | 2 |
GCTGGGA | 11295 | 0.0 | 42.23515 | 9 |
ACTCGGG | 1640 | 0.0 | 42.16005 | 4 |
AAGTGCT | 5900 | 0.0 | 41.454487 | 5 |
GTAGCTG | 5435 | 0.0 | 41.353073 | 6 |
TAGCTGG | 5700 | 0.0 | 41.07192 | 7 |
CCCGAGT | 1785 | 0.0 | 40.58675 | 1 |
TCGCGAA | 70 | 4.638523E-6 | 40.28469 | 94 |
CAAAGTG | 6395 | 0.0 | 40.012287 | 3 |
GGAGGCT | 8675 | 0.0 | 39.929348 | 9 |
TCGGGAG | 1785 | 0.0 | 39.77573 | 6 |