FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20494459
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA186600.05.816119794-95
ATCGGAA183200.05.470358494-95
AGATCGG201450.05.316649494-95
TCCGATA27000.05.189006392-93
CGATAAT26200.05.1665794-95
TAGATCG65050.05.110656392-93
Produced by FastQC (version 0.11.5)