FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26928761
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA124550.05.722809394-95
GCGTCGT133350.05.273882494-95
GTCGTGT126350.05.265196394-95
AGCGTCG147050.05.21878394-95
CGTGTAG135350.05.213506794-95
TAGATCG85450.05.199496394-95
GATCGGA247150.05.152712394-95
ATCGGAA246850.05.0338594-95
Produced by FastQC (version 0.11.5)