FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24149193
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT139450.05.758690494-95
AGCGTCG154750.05.695984494-95
CGTCGTG137150.05.612737794-95
TCGTGTA117300.05.61057494-95
GATCGGA267050.05.382553694-95
AGATCGG294700.05.26451894-95
GTCGTGT129650.05.222733594-95
ATCGGAA261650.05.19398794-95
GAGCGTC188250.05.136708794-95
CGTGTAG123950.05.079545594-95
TCGGAAG276950.05.052885594-95
CTATCGT34100.05.016532494-95
Produced by FastQC (version 0.11.5)