FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30002079
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA329300.05.86307394-95
AGATCGG361100.05.62296194-95
CGCTAAT30700.05.492201394-95
ATCGGAA318800.05.46024594-95
CGTCTGA155650.05.1722294-95
TAGATCG112450.05.13184294-95
Produced by FastQC (version 0.11.5)